Boutique hotel vacation rentals in San Juan Islands

Find and book unique boutique hotel rentals on Airbnb

Top-rated boutique hotel rentals in San Juan Islands

Guests agree: these boutique hotel rentals are highly rated for location, cleanliness, and more.

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Superhost

An inviting entryway features a classic wooden reception desk paired with a plush loveseat. Exposed brick walls create a warm ambiance, while sunlight streams through nearby windows, enhancing the welcoming atmosphere. A staircase leads to the upper floors, adding to the hotel’s historic charm.

Hotel room in Seattle

4.74 out of 5 average rating, 182 reviews

College Inn - Premium 2 Queen Room with Private Bath

Our newest room - with its own private bathroom! Our family-owned College Inn is an authentic European-style hotel in the heart of Seattle's vibrant University District & on the campus of the University of Washington, surrounded by restaurants, shops, cafes, and pubs. Newly remodeled in 2019, our guests enjoy modern comforts while in a hotel that is on the National Register of Historic Places. *In the tradition of "European-style" hotels, we have a shared kitchen, complimentary coffee & tea, and a Loft common area.

Guest favorite

An outdoor area features a circular arrangement of orange lounge chairs around a fire pit. Surrounding the space are natural elements, including trees and gravel pathways, with a modern building visible in the background under clear blue skies.

Hotel room in Friday Harbor

5 out of 5 average rating, 77 reviews

Private guesthouse w/ hot tub & breathtaking views

Your private guesthouse awaits at ~ Inn at Saltwater Farm ~ a modern, Scandinavian-style, boutique inn situated on 162 wild and beautiful acres just outside the town of Friday Harbor. Escape to your separate and private guesthouse with breathtaking views, modern amenities, and miles of trails, gardens, and natural beauty to explore. Cedar hot tub in the deck overlooking the Salish Sea, outdoor shower, and pet friendly for friendly pets! KING bedroom + QUEEN loft + DOUBLE sleeper sofa + bthrm.

Guest favorite

An elevated wooden pavilion is surrounded by tall trees, with steps leading up to its spacious deck. Colorful hammocks hang from the structure, inviting relaxation. Natural landscaping features rocks and greenery, blending harmoniously with the serene outdoor setting.

Hotel room in Cobble Hill

5 out of 5 average rating, 114 reviews

Welcome to Lavender View

Serenity and quality abound. We want your stay at Lavender View to be exceptional. We offer luxurious accommodation and top quality service in a resort-like setting on 2.5 acres. We use the Airbnb platform exclusively to handle all of our reservations. However, we encourage you to visit our own website (Lavenderview dot ca). Our website provides more information & detail on who we are and what we offer. The “Book Now” button will take you back to this Airbnb listing to make your reservation.

Guest favorite

The modern building features large glass windows reflecting the city lights. Street-level entries are visible, alongside landscaped steps leading to the entrance. Surrounding structures highlight the downtown area, contributing to the urban atmosphere.

Hotel room in Seattle

4.94 out of 5 average rating, 554 reviews

Modern Executive Suite Near Pike and Waterfront

An upscale executive studio suite with an amazing downtown location. We are a 1/2 block walk to Pike Place Market, a 2 minute walk to the Seattle Waterfront & Ferris Wheel, 200' from the train, and right next door to the Seattle Art Museum. The room comes with two queen beds and couch, Egyptian cotton bedding, full kitchen, appliances, 1G internet, work space, and Starbucks coffee. No Cleaning Fee!!! Advanced COVID cleaning including UV - C disinfectant and medical grade HEPA air filtration.

Guest favorite

A dining area is presented with a dark wooden table set for breakfast, featuring white plates and blue napkins. Large windows offer views of the water and outdoor seating, allowing natural light to fill the space. Potted plants add a touch of greenery.

Hotel room in Coupeville

4.98 out of 5 average rating, 99 reviews

Anchorage Inn - room #4 - The Onward

The Onward (rm 4) is in our turret, has a water view, queen bed for 2, full private bath, smart TV streaming, & fiber WiFi. Refrigerator, microwave & Keurig coffee maker are available. You can enjoy a hot breakfast served in the dining room on the first floor for NO FEE. Our award winning Inn has 6 rooms, all with different prices because they all offer a different combination of space, K or Q bed, and views. These rooms range in price depending on that combination and the time of year.

Superhost

A spacious bedroom features a king bed adorned with crisp linens and decorative pillows. Large sliding glass doors open to a private deck, revealing a hot tub and lush garden view. Warm wood accents are complemented by soft lighting and neutral decor.

Hotel room in Sequim

5 out of 5 average rating, 4 reviews

Lavender King Suite, kitchen, Hot tub

King bed in its own room. Euro-lounger in Livingroom that makes into a double. Your own private bath has a giant tile rain shower, HOT TUB off back deck facing water. Full kitchen including microwave, 3/4 size refrigerator, stove and all pots, pans, dishes and utensils. The dining area is in the sun-room and looks out towards the bay. Electric fireplace and 50in TV!! Coffee and tea are provided. Other amenities include hairdryer, fine microfiber bathrobes, cable TV, VCR and DVD.

A welcoming entryway features polished wooden accents and a decorative staircase leading to upper levels. Natural light filters through a glass-paneled door adorned with green leaf motifs. A potted plant adds a touch of greenery, enhancing the inviting atmosphere of the space.

Hotel room in Seattle

4.82 out of 5 average rating, 159 reviews

Charming Room in Historic Inn with Parking - Rm 4

Tranquil room & bath in gorgeous Victorian inn. Enjoy modern amenities alongside all of the 1906 charm. All rooms feature fast wifi, private bath, plenty of closet space, SmartTV, & laptop friendly workspace. The Foxglove Inn is situated in the heart of vibrant Capitol Hill. Just a block from the light rail station, multiple bus stops & street car. Walk to numerous restaurants, coffee shops, parks, and shopping all just minutes away!

The heritage building is surrounded by landscaped gardens and mature trees. A set of stone steps leads to the entrance, framed by greenery and flowers. The architecture features distinct elements, including a sloped roof and decorative windows, with a castle view visible in the background.

Hotel room in Victoria

4.72 out of 5 average rating, 106 reviews

Superior queen room #8

The Craigmyle is a heritage building. Elegant, inviting, and completely unique – The Craigmyle redefines boutique hotel living in the heart of Victoria, BC. Tucked away in one of the city’s gorgeous residential neighborhoods, just two minutes from the historic Craigdarroch Castle, our hotel places the city’s top attractions at your doorstep, while maintaining a sense of calm and tranquility that sure to relax and inspire you.

Superhost

A spacious suite is depicted, featuring two queen-sized beds against a backdrop of wooden accent walls. A kitchenette bar with three stools is visible, along with a cozy armchair. The entry leads to a private bathroom and additional sleeping area, enhancing the suite's comfort.

Hotel room in Port Angeles

4.87 out of 5 average rating, 110 reviews

#6 ✤Perfect Family Retreat- Olympic National Park✤

Our recently remodeled 2 bedroom suite is perfect for a getaway for two couples, or friends! Located in the heart Olympic National Park, each room features a comfy, queen-sized bed. The kitchenette includes a sink, mini-fridge, and microwave and makes for an ideal refreshment area. The full-sized and private bathroom can easily accommodate all guests. (Please note that there is no door between the two rooms.)

Superhost

A spacious room features a large bed with crisp white linens and plush pillows. Natural light filters through multiple windows, which offer views of the surroundings. A comfortable seating area with a green sofa and decorative pillows is positioned near the windows, complemented by contemporary bedside lamps.

Hotel room in Seattle

4.8 out of 5 average rating, 15 reviews

Watertown Hotel, Montlake Junior Suite

Located in Seattle’s University District, Watertown Hotel puts you in a prime location in Seattle. Our hotel is where urban meets upscale, blending the two concepts into our style hotel offering. Guests will have excellent comfort and signature amenities for modern living from our Staypineapple Hotel brand. An amenity fee with Tax ($28.87 per day) will be charged upon arrival.

Guest favorite

A charming boutique inn is framed by blooming white daffodils lining a brick pathway. The soft glow of exterior lights highlights the inviting architecture against a twilight sky, creating a serene approach to the entrance.

Hotel room in Lopez Island

4.92 out of 5 average rating, 104 reviews

•Sweet Island Hotel• Fireplace, Soaking Tub, WIFI

✔ Super Fast WIFI ✔ Fireplace ✔ In Room Coffee + Decaf & Tea ✔ Full Bathroom w. Soaking Tub ✔ 24/7 Staff That There When You Need Them and Never When You Don't :) ✔ Access to All Common Spaces at Edenwild Boutique Hotel ✔ Onsite Bicycle and Kayak rentals We think of every aspect of your stay, and our staff is always there when you need us and never when you don’t.

Guest favorite

A clear image captures the tranquil shoreline along the Strait of Juan de Fuca, with a calm blue water surface reflecting the sky. The distant mountains provide a scenic backdrop, while a few homes and lush greenery line the shore.

Hotel room in Sequim

4.83 out of 5 average rating, 205 reviews

Sunset Log Cabin on the beach-Hot tub-full kitchen

Escape to the Pacific Northwest! • Cozy studio cabin with a Queen Log Bed and 65” TV • Stunning views of the Strait of Juan de Fuca • Full kitchen and private patio • Shared hot tub, fire pits, and barbecues • Beach access just a short walk away • Laundry room available for convenience Perfect for a relaxing getaway!